R packages by kylebittinger

usedist - Distance Matrix Utilities

Functions to re-arrange, extract, and work with distances.

Last updated 9 months ago

6.63 score 14 stars 6 dependents 169 scripts 489 downloads

abdiv - Alpha and Beta Diversity Measures

A collection of measures for measuring ecological diversity. Ecological diversity comes in two flavors: alpha diversity measures the diversity within a single site or sample, and beta diversity measures the diversity across two sites or samples. This package overlaps considerably with other R packages such as 'vegan', 'gUniFrac', 'betapart', and 'fossil'. We also include a wide range of functions that are implemented in software outside the R ecosystem, such as 'scipy', 'Mothur', and 'scikit-bio'. The implementations here are designed to be basic and clear to the reader.

Last updated 1 years ago

4.14 score 9 stars 31 scripts 503 downloads